Deferribacter

Deferribacter
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Deferribacterota
Class: Deferribacteres
Order: Deferribacterales
Family: Deferribacteraceae
Genus: Deferribacter
Greene et al. 1997[1]
Type species
Deferribacter thermophilus
Greene et al. 1997
Species

Deferribacter is a genus in the phylum Deferribacterota (Bacteria).[2]

Etymology

The name Deferribacter derives from:
Latin pref. de-, from; Latin noun ferrum, iron; Neo-Latin masculine gender noun, a rodbacter, nominally meaning "a rod", but in effect meaning a bacterium, rod; Neo-Latin masculine gender noun Deferribacter, rod that reduces iron.[3]

Species

The genus contains 4 species, namely[3]

  • D. abyssi Miroshnichenko et al. 2003; (Latin genitive case noun abyssi, of immense depths, living in the depths of the ocean.)[4]
  • D. autotrophicus Slobodkina et al. 2009; (Neo-Latin masculine gender adjective autotrophicus, autotrophic.)[5]
  • D. desulfuricans Takai et al. 2003; (Neo-Latin participle adjective desulfuricans, reducing sulfur.)[6]
  • D. thermophilus Greene et al. 1997 ((Type species of the genus).; Greek noun thermē (θέρμη), heat; Neo-Latin masculine gender adjective philus (from Greek masculine gender adjective φίλος), friend, loving; Neo-Latin masculine gender adjective thermophilus, heat loving.)[1]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[7] and National Center for Biotechnology Information (NCBI)[8]

16S rRNA based LTP_01_2022[9][10][11] GTDB 07-RS207 by Genome Taxonomy Database[12][13][14]

D. abyssi Miroshnichenko et al. 2003

D. autotrophicus Slobodkina et al. 2009

D. desulfuricans Takai et al. 2003

D. thermophilus Greene et al. 1997

See also

References

  1. 1 2 "Deferribacter thermophilus gen. nov., sp. nov., a Novel Thermophilic Manganese- and Iron-Reducing Bacterium Isolated from a Petroleum Reservoir -- GREENE et al. 47 (2): 505 -- International Journal of Systematic and Evolutionary Microbiology". Archived from the original on 2008-08-29. Retrieved 2011-05-28.
  2. ↑ Classification of Genera DL in LPSN; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi:10.1099/ijsem.0.004332.
  3. 1 2 Deferribacter in LPSN; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi:10.1099/ijsem.0.004332.
  4. ↑ "Deferribacter abyssi sp. nov., an anaerobic thermophile from deep-sea hydrothermal vents of the Mid-Atlantic Ridge -- Miroshnichenko et al. 53 (5): 1637 -- International Journal of Systematic and Evolutionary Microbiology". Archived from the original on 2008-10-13. Retrieved 2011-05-28.
  5. ↑ Slobodkina, G. B.; Kolganova, T. V.; Chernyh, N. A.; Querellou, J.; Bonch-Osmolovskaya, E. A.; Slobodkin, A. I. (2009). "Deferribacter autotrophicus sp. Nov., an iron(III)-reducing bacterium from a deep-sea hydrothermal vent". International Journal of Systematic and Evolutionary Microbiology. 59 (6): 1508–1512. doi:10.1099/ijs.0.006767-0. PMID 19502344.
  6. ↑ "Deferribacter desulfuricans sp. nov., a novel sulfur-, nitrate- and arsenate-reducing thermophile isolated from a deep-sea hydrothermal vent -- Takai et al. 53 (3): 839 -- International Journal of Systematic and Evolutionary Microbiology". Archived from the original on 2011-05-05. Retrieved 2011-05-28.
  7. ↑ A.C. Parte; et al. "Deferribacter". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
  8. ↑ Sayers; et al. "Deferribacter". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
  9. ↑ "The LTP". Retrieved 23 February 2022.
  10. ↑ "LTP_all tree in newick format". Archived from the original on 4 September 2022. Retrieved 23 February 2022.
  11. ↑ "LTP_01_2022 Release Notes" (PDF). Retrieved 23 February 2022.
  12. ↑ "GTDB release 07-RS207". Genome Taxonomy Database. Retrieved 20 June 2022.
  13. ↑ "ar53_r207.sp_label". Genome Taxonomy Database. Retrieved 20 June 2022.
  14. ↑ "Taxon History". Genome Taxonomy Database. Retrieved 20 June 2022.
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